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+---- Forum: Desirable AOP-Wiki features (https://forum.aopwiki.org/forumdisplay.php?fid=22)
+---- Thread: Alignment of the AOP-Wiki with the FAIR principles (/showthread.php?tid=197)
Alignment of the AOP-Wiki with the FAIR principles - penny.nymark@ki.se - 14 Dec 2022
This thread is meant to start discussions around FAIRification of the AOP-Wiki.
Details about the FAIR principles can be found here: https://www.go-fair.org/fair-principles/
In summary, the FAIR principles support machine-readability and reuse of data/information/knowledge. The acronym stands for:
Findability - facilitated e.g. by rich annotation of (meta)data using persistent identifiers and ontologies
Accessibility - facilitated e.g. by standardized communication protocols
Interoperability - facilitated e.g. by formal, accessible and broadly shared languages and vocabularies (e.g. ontologies), as well as qualified references to related information (links to other databases)
Reusability - facilitated e.g. by clear reuse licenses and detailed provenance
Some initial low-hanging fruit can be suggested to support increased FAIRness of the AOP-Wiki, including:
- researcher ORCID:s for AOP developers and coaches
- doi:s for references
- KE component use broadened
- annotation of e.g. genes/proteins with commonly accepted identifiers or vocabulary, e.g. HUGO Gene Nomeclatur (HGNC)
RE: Alignment of the AOP-Wiki with the FAIR principles - penny.nymark@ki.se - 15 Jun 2023
Further considerations regarding enhancing the FAIRness of the AOP-Wiki include:
- development of a FAIR Implementation Profile (FIP) for the AOP-Wiki
- discussion regarding the social agreements that are needed to enhance FAIRness of AOP-Wiki (in line with the blue FAIR principles as presented in Schultes 2023, https://doi.org/10.3233/FC-221514